PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do020468.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family Dof
Protein Properties Length: 259aa    MW: 26591.4 Da    PI: 8.7971
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do020468.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1222.1e-3847104562
      zf-Dof   5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                   +cprC+s++tkfCyynny++sqPr+fCk+CrryWtkGG+lrnvPvGgg+rk+ +ss
  Do020468.1  47 GDPCPRCESRDTKFCYYNNYNTSQPRHFCKSCRRYWTKGGSLRNVPVGGGTRKSSSSS 104
                 578**************************************************99876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-234796IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.70548102IPR003851Zinc finger, Dof-type
PfamPF027013.9E-3249102IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105086IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MQEPGRRAAP PFAGVDLRRP KGYPAPAPVA KAEEHASLLA SSAPAAGDPC PRCESRDTKF  60
CYYNNYNTSQ PRHFCKSCRR YWTKGGSLRN VPVGGGTRKS SSSSSSSSAS SSPAATKATK  120
RSKNSKRRRV APAPDPASGT DASAAAAITG VANTARTPAP STVAAATVDD TKKPTAPEPA  180
ATVVAATEEP SAPPAAVGGF TDDTSTAPGN GLADVDSGGG KELLPDPNHF EWPSSCDLGS  240
YWGTGVFADT DPVLFLNLP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125129KRRRV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004957110.11e-115PREDICTED: dof zinc finger protein MNB1A-like
SwissprotP385646e-55MNB1A_MAIZE; Dof zinc finger protein MNB1A
TrEMBLK3ZVZ31e-115K3ZVZ3_SETIT; Uncharacterized protein
STRINGSi030774m1e-115(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP14037367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.15e-26DOF zinc finger protein 1